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Table 1 List of taxa included in each dataset

From: Phylogenetic position of Loricifera inferred from nearly complete 18S and 28S rRNA gene sequences

Taxa

Data set

Accession number

  

Species

18S + 28S (50OTU)

18S (50OTU)

28S (50OTU)

18S (65OTU)

18S (63OTU)

18S

28S

Loricifera

 

Rugiloricus sp.

â—‹

â—‹

â—‹

â—‹

â—‹

LC032019

LC032020

  

Nanaloricus sp.

   

â—‹

 

EU669461

 
  

Pliciloricus sp. 

   

â—‹

â—‹

AY746986

-

Arthropoda

Euchelicerata

Limulus polyphemus

â—‹

â—‹

â—‹

â—‹

â—‹

U91490

AF212167

  

Calocheiridius cf. termitophilus

â—‹

â—‹

â—‹

â—‹

â—‹

AY859559

AY859558

  

Siro rubens

â—‹

â—‹

â—‹

â—‹

â—‹

U36998

AY859602

  

Eremobates sp.

â—‹

â—‹

â—‹

â—‹

â—‹

AY859573

AY859572

  

Pandinus imperator

â—‹

â—‹

â—‹

â—‹

â—‹

AY210831

AY210830

  

Mastigoproctus giganteus

â—‹

â—‹

â—‹

â—‹

â—‹

AF005446

AY859587

  

Misumenops asperatus

â—‹

â—‹

â—‹

â—‹

â—‹

AY210445

AY210461

 

Pycnogonida

Anoplodactylus portus

â—‹

â—‹

â—‹

â—‹

â—‹

AY859551

AY859550

  

Callipallene sp.

â—‹

â—‹

â—‹

â—‹

â—‹

AY210808

AY210807

 

Myriapoda

Polyxenidae sp.

â—‹

â—‹

â—‹

â—‹

â—‹

AY859596

AY859595

  

Orthoporus sp.

â—‹

â—‹

â—‹

â—‹

â—‹

AY210829

AY210828

  

Cherokia georgiana

â—‹

â—‹

â—‹

â—‹

â—‹

AY859563

AY859562

  

Scutigera coleoptrata

â—‹

â—‹

â—‹

â—‹

â—‹

AF173238

AY859601

  

Craterostigmus tasmanianus

â—‹

â—‹

â—‹

â—‹

â—‹

AF000774

AY859569

 

Crustacea

Cyprididae sp.

â—‹

â—‹

â—‹

â—‹

â—‹

AY210816

AY210815

  

Anaspides tasmaniae

â—‹

â—‹

â—‹

â—‹

â—‹

L81948

AY859549

  

Squilla empusa

â—‹

â—‹

â—‹

â—‹

â—‹

L81946

AY210842

  

Heteromysis sp.

â—‹

â—‹

â—‹

â—‹

â—‹

AY859580

AY859578–79

  

Gaetice depressus

â—‹

â—‹

â—‹

â—‹

â—‹

AY859577

AY859575–76

  

Panulirus argus

â—‹

â—‹

â—‹

â—‹

â—‹

U19182

AY210833–35

  

Homarus americanus

â—‹

â—‹

â—‹

â—‹

â—‹

AF235971

AY859581

  

Eulimnadia texana

â—‹

â—‹

â—‹

â—‹

â—‹

AF144211

AY859574

  

Triops longicaudatus

â—‹

â—‹

â—‹

â—‹

â—‹

AF144219

AY157606

 

Hexapoda

Podura aquatica

â—‹

â—‹

â—‹

â—‹

â—‹

AF005452

AY210838

  

Sminthurus viridus

â—‹

â—‹

â—‹

â—‹

â—‹

AY859604

AY859603

  

Dilta littoralis

â—‹

â—‹

â—‹

â—‹

â—‹

AF005457

AY859570–71

  

Callibaetis ferrugineus

â—‹

â—‹

â—‹

â—‹

â—‹

AF370791

AY859557

  

Mantis religiosa

â—‹

â—‹

â—‹

â—‹

â—‹

AY859586

AY859585

  

Zootermopsis angusticollis

â—‹

â—‹

â—‹

â—‹

â—‹

AY859615

AY859614

  

Gromphadorhina laevigata

â—‹

â—‹

â—‹

â—‹

â—‹

AY210820

AY210819

  

Gomphocerinae sp.

â—‹

â—‹

â—‹

â—‹

â—‹

AY859547

AY859546

  

Vespula pensylvanica

â—‹

â—‹

â—‹

â—‹

â—‹

AY859613

AY859612

  

Merope tuber

â—‹

â—‹

â—‹

â—‹

â—‹

AF286287

DQ202351

Onychophora

 

Peripatoides novaezealandiae

â—‹

â—‹

â—‹

â—‹

â—‹

AF342794

AF342791–93

Tardigrada

 

Milnesium tardigradum

â—‹

â—‹

 

â—‹

â—‹

U49909

-

  

Milnesium sp.

â—‹

 

â—‹

  

-

AY210826

  

Echiniscus blumi

   

â—‹

â—‹

HM193375

 
  

Testechiniscus spitzbergensis

   

â—‹

â—‹

EU266967

 
  

Richtersius coronifer

   

â—‹

â—‹

AY582123

 

Nematoda

Spiurina

Ascaris lumbricoides

â—‹

â—‹

â—‹

â—‹

â—‹

U94366

AY210806

 

Dorylaimia

Trichinella spiralis

â—‹

â—‹

â—‹

â—‹

â—‹

U60231

AF342803

  

Xiphinema rivesi

â—‹

â—‹

â—‹

â—‹

â—‹

AF036610

AY210845

 

Enoplia

Pontonema vulgare

   

â—‹

â—‹

AF047890

 
 

Desmodorida

Spirinia elongata

   

â—‹

â—‹

EF527426

 
 

Monhysterida

Theristus agilis

   

â—‹

â—‹

AY284695

Nematomorpha

 

Chordodes morgani

â—‹

â—‹

â—‹

â—‹

â—‹

AF036639

AF342787

  

Gordius aquaticus

â—‹

â—‹

â—‹

â—‹

â—‹

X80233

AY210817

  

Nectonema agile

   

â—‹

â—‹

AF421767

Priapulida

 

Priapulus caudatus

â—‹

â—‹

â—‹

â—‹

â—‹

Z38009

AY210840

  

Halicryptus spinulosus

â—‹

â—‹

â—‹

â—‹

â—‹

AF342790

AF342789

  

Tubiluchus corallicola

   

â—‹

â—‹

AF119086

 
  

Meiopriapulus fijiensis

   

â—‹

 

JN211192

 

Kinorhyncha

 

Pycnophyes sp.

â—‹

â—‹

â—‹

â—‹

â—‹

AY859598

AY859597

  

Dracoderes abei

   

â—‹

â—‹

AB738350

AB738351

  

Echinoderes dujardinii

   

â—‹

â—‹

LC007044

LC007065

  

Centroderes spinosus

   

â—‹

â—‹

KF372858

  

Campyloderes cf. vanhoeffeni

   

â—‹

â—‹

LC007037

 

Lophotrochozoa (Outgroup)

Nemertea

Amphiporus sp.

â—‹

â—‹

â—‹

â—‹

â—‹

AF119077

AF342786

 

Mollusca

Placopecten magellanicus

â—‹

â—‹

â—‹

â—‹

â—‹

X53899

AF342798

 

Platyhelminthes

Stylochus zebra

â—‹

â—‹

â—‹

â—‹

â—‹

AF342801

AF342800

 

Echiura

Urechis caupo

â—‹

â—‹

â—‹

â—‹

â—‹

AF342805

AF342804

Deuterostomes (Outgroup)

Hemichordata

Ptychodera fava

â—‹

â—‹

â—‹

â—‹

â—‹

AF278681

AF212176

 

Chordata

Ciona intestinalis

â—‹

â—‹

â—‹

â—‹

â—‹

AB013017

AF212177

  1. Taxa included in each data set, with GenBank accession numbers for sequences