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Table 4 Summary of repeated elements in D. japonica genome

From: Draft genome of Dugesia japonica provides insights into conserved regulatory elements of the brain restriction gene nou-darake in planarians

Repeated Elements

Numbers of elementsa

Length (bp)

Percentage of genome (%)

Retrotransposon

260,765

122,888,499

7.85%

 LTR-Retrotransposon

194,395

101,831,050

6.51%

 Non-LTR Retrotransposon

66,370

21,057,449

1.35%

DNA Transposon

323,715

109,645,290

7.01%

Unclassified

1,602,282

355,858,117

22.74%

Small RNA

4762

993,638

0.06%

Simple repeats

411,512

27,237,668

1.74%

Low complexity

80,856

4,603,818

0.29%

Total count

2,683,892

621,227,030

39.69%

  1. aMost repeats fragmented by insertions or deletions were counted as one element