Table 1 Prospective Xenopus XKol transposase CDSs
Name | Locus | Longest ORF | Trimmed CDS | No. of truncated copies |
|---|---|---|---|---|
A. Prospective X. tropicalis XKol transposase CDSs | ||||
Tr1 | Chr05:4592573..4595167(−) | 2595 bp | 2202 bp | 1 |
Tr2 | Chr02:100830975..100833458(+) | 2484 bp | 2421 bp | 3 |
Tr3 | Chr01:90056839..90059247(+) | 2409 bp | 2409 bp | 0 |
Tr4 | Chr09:49289527..49291908(+) | 2382 bp | 2319 bp | 0 |
Tr5 | scaffold_769:44126..46486(−) | 2361 bp | 2361 bp | 10 |
Tr6 | scaffold_3164:2182..4536(−) | 2355 bp | 2355 bp | 5 |
Tr7 | Chr02:77614330..77616681(−) | 2352 bp | 2352 bp | 2 |
Tr8 | Chr08:54548260..54550611(+) | 2352 bp | 2352 bp | 9 |
Tr9 | Chr02:55486066..55488417(+) | 2352 bp | 2352 bp | 2 |
Tr10 | Chr08:50277255..50279597(+) | 2343 bp | 2292 bp | 0 |
Tr11 | scaffold_609:18293..20635(−) | 2343 bp | 2343 bp | 9 |
Tr12 | Chr06:112308032..112310368(−) | 2337 bp | 2250 bp | 9 |
Tr13 | Chr02:162067553..162069883(−) | 2331 bp | 2331 bp | 0 |
Tr14 | scaffold_51:231432..233759(−) | 2328 bp | 2328 bp | 5 |
Tr15 | Chr01:83498100..83500424(+) | 2325 bp | 2325 bp | 5 |
Tr16 | Chr04:108160710..108163031(−) | 2322 bp | 2322 bp | 0 |
Tr17 | Chr09:29639969..29642278(−) | 2310 bp | 2310 bp | 0 |
Tr18 | Chr02:66952233..66954539(−) | 2307 bp | 2307 bp | 0 |
Tr19 | Chr04:41679747..41682050(+) | 2304 bp | 2229 bp | 0 |
Tr20 | scaffold_16:1256554..1258851(+) | 2298 bp | 2298 bp | 4 |
Tr21 | Chr04:107657217..107659511(+) | 2295 bp | 2295 bp | 9 |
Tr22 | Chr01:168455606..168457900(−) | 2295 bp | 2295 bp | 9 |
Tr23 | Chr03:106168762..106171056(−) | 2295 bp | 2295 bp | 9 |
Tr24 | scaffold_561:30795..33086(−) | 2292 bp | 2256 bp | 0 |
Tr25 | Chr01:107512548..107514821(+) | 2274 bp | 2274 bp | 4 |
Tr26 | Chr09:13318232..13320439(−) | 2208 bp | 2208 bp | 0 |
Tr27 | scaffold_4830:88..2292(−) | 2205 bp | 2205 bp | 5 |
Tr28 | Chr04:128881775..128883943(−) | 2169 bp | 2169 bp | 0 |
Tr29 | Chr04:128872195..128874363(−) | 2169 bp | 2169 bp | 0 |
Tr30 | Chr09:10540280..10542436(+) | 2157 bp | 2157 bp | 0 |
Tr31 | Chr09:10547870..10549993(+) | 2124 bp | 2091 bp | 0 |
Tr32 | Chr03:80573408..80575504(+) | 2097 bp | 2097 bp | 0 |
Tr33 | Chr09:10557320..10559413(+) | 2094 bp | 2094 bp | 1* |
Tr34 | scaffold_731:1892..3937(−) | 2046 bp | 2046 bp | 0 |
Tr35 | Chr05:37113502..37115535(−) | 2034 bp | 2034 bp | 3 |
Tr36 | scaffold_161:120530..122407(+) | 1878 bp | 1878 bp | 8 |
Tr37 | Chr01:130854739..130856610(−) | 1872 bp | 1872 bp | 0 |
Tr38 | Chr09:29654976..29656787(−) | 1812 bp | 1812 bp | 0 |
B. Prospective X. laevis XKol transposase CDSs | ||||
Lv1 | chr9_10L:117582522..117585011(−) | 2490 bp | 2433 bp | 4 |
Lv2 | chr6S:1512718..1515198(−) | 2481 bp | 2481 bp | 1* |
Lv3 | chr1L:4995471..4997924(−) | 2454 bp | 2454 bp | 4 |
Lv4 | chr8L:50116481..50118844(+) | 2364 bp | 2292 bp | 0 |
Lv5 | Scaffold261:26626..28977(+) | 2352 bp | 2352 bp | 0 |
Lv6 | chr8L:99349197..99351548(−) | 2352 bp | 2352 bp | 2 |
Lv7 | chr2L:167641114..167643453(−) | 2340 bp | 2340 bp | 0 |
Lv8 | chr2S:147754724..147757057(−) | 2334 bp | 2334 bp | 0 |
Lv9 | chr9_10L:77656066..77658378(+) | 2313 bp | 2313 bp | 0 |
Lv10 | chr4S:91247377..91249686(−) | 2310 bp | 2310 bp | 1* |
Lv11 | chr4S:1463674..1465929(−) | 2256 bp | 2217 bp | 1* |
Lv12 | chr3L:58143401..58145647(+) | 2247 bp | 2211 bp | 0 |
Lv13 | chr9_10L:110876140..110878383(−) | 2244 bp | 2244 bp | 0 |
Lv14 | chr4L:133759875..133762109(+) | 2235 bp | 2187 bp | 0 |
Lv15 | chr4S:20852192..20854426(−) | 2235 bp | 2235 bp | 0 |
Lv16 | chr4L:26594086..26596320(+) | 2235 bp | 2235 bp | 1* |
Lv17 | chr4S:1470489..1472717(−) | 2229 bp | 2229 bp | 2* |
Lv18 | chr6L:145404209..145406428(−) | 2220 bp | 2220 bp | 0 |
Lv19 | chr9_10L:110897783..110899978(−) | 2196 bp | 2196 bp | 0 |
Lv20 | chr4S:112529046..112531238(−) | 2193 bp | 2193 bp | 0 |
Lv21 | chr4S:112539344..112541533(−) | 2190 bp | 2190 bp | 0 |
Lv22 | chr4L:133769461..133771647(+) | 2187 bp | 2187 bp | 0 |
Lv23 | Scaffold22:1796503..1798647(−) | 2145 bp | 2145 bp | 3 |
Lv24 | chr4L:26633802..26635940(+) | 2139 bp | 2103 bp | 0 |